Protein ZmbHLH88
ZmbHLH88 is a protein in the bHLH family.
Information
TF Name: ZmbHLH88
Species: Maize
TF Family: bHLH
Gene Name(Synonym): BHLH88
Uniprot ID: C0HIC0
Subgenome: 2

Protein ZmbHLH88

ZmbHLH88 is a protein in the bHLH family.

Overview of domains present in v5 transcripts
PF00010
Zm00001eb099470_T002
Zm00001eb099470_T001
Zm00001eb099470_T003
Zm00001eb099470_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d005750DAPseq no logo sequence fimo position
Zm00001d005750DAPseq no logo sequence fimo position
Zm00001d005750ChIPseq no logo sequence fimo position
Zm00001d005750PChIPseq no logo sequence fimo position

Interactions where ZmbHLH88 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH88 is the target  
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There are 3 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb099470_T002 from maize genome v5

Amino Acid Sequence
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MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPR
QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLV
ADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAA
AAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00010
PF00010
PF00010
Hover here to show all domains

Nucleotide Sequence
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TTCCACCACTGTGAACCACATGATA...

GRMZM2G350165_T01 from maize genome v3


Related TFome: pUT6033

Amino Acid Sequence
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MQPTTREMQAMAAAGQQISLDDLRAAAGGVHDDFLDQMLGGLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGGGG
LYDDSALLASRLRQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDGGLLLPLSLGSGGSGGDVQAL
LKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPRQRVR
ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMS
SEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAAAAHH
MAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

Nucleotide Sequence
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CGCCAACCCCGGCCTGCTCCTGCTT...

GRMZM2G350165_T02 from maize genome v3

Amino Acid Sequence
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MQPTTREMQAMAAAGQQISLDDLRAAAGGVHDDFLDQMLGGLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGGGG
LYDDSALLASRLRQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDGGLLLPLSLGSGGSGGDVQAL
LKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPRQRV
RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLVADM
SSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAAAAH
HMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

Nucleotide Sequence
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CGCCAACCCCGGCCTGCTCCTGCTT...

Zm00001d005750_T001 from maize genome v4

Amino Acid Sequence
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MQPTTREMQAMAAAGQQISLDDLRAAAGGVHDDFLDQMLGGLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGVGP
VRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAAGHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGAT
QSCSRLRRRRSRRRLRRFLRRIAPPPPAAAAAFSITSAACPCSRRSRPWRPTAPGVGLMARARTRSSSSGIIPRTPRPCR
SRDPLVNVKATAAVTLTAQP

Nucleotide Sequence
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GGCCTGCTCCTGCTTGTCTTTCCTT...

Zm00001d005750_T002 from maize genome v4

Amino Acid Sequence
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MAARRRSRCSTSRSTWVGWGLYDDSALLASRLRQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDG
GLLLPLSLGSGGSGGDVQALLKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGV
SQPQAGAACGGAAAPPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVL
SMSRLGGAAAVAPLVADMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCH
MRPPVGGPGLGVAAAAAHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHP
KDAASVSKP

Nucleotide Sequence
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GGCCTGCTCCTGCTTGTCTTTCCTT...

Zm00001eb099470_T001 from maize genome v5

Amino Acid Sequence
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MAGAVVRGGREGAGWRRAGGADAAPAAALGWGWGPVRRLRLAGVAAPAAPNQRRRRRGGREADGAAAAGRSEAGTPCVAA
GHGPLDLDGRQQRRRPAPPALSRQWRIGRRRAGATQSCSRLRRTDPSSSPSLLKSTCRLFTRQESIIFWKNKREREREKL
AFLFGVRSSFQGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPRQ
RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLVA
DMSSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAAA
AHHMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

Nucleotide Sequence
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TGTAGCTTGAGGCTGAGCACCCCAT...

Zm00001eb099470_T003 from maize genome v5

Amino Acid Sequence
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MQPTTREMQAMAAAGQQISLDDLRAAAGGVHDDFLDQMLGGLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGGGG
LYDDSALLASRLRQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDGGLLLPLSLGSGGSGGDVQAL
LKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPRQRVR
ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMS
SEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAAAAHH
MAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

Nucleotide Sequence
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ACATTCGATTCCGTTCTGATCCATC...

Zm00001eb099470_T004 from maize genome v5

Amino Acid Sequence
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MQPTTREMQAMAAAGQQISLDDLRAAAGGVHDDFLDQMLGGLPPSAWPELSSAAGGKAPDGGAQAEQMQHQPQHLGGGGG
LYDDSALLASRLRQHQISGGGGGEAVKQMVLQQLADLRQEHHVLLQGMGRSTSTGGSRDGGLLLPLSLGSGGSGGDVQAL
LKAVADSAGGEAAGVFGGSFAGSLHHHQQQQQHFQSHPQQQTAPLPGQGFGGGAGASGGVSQPQAGAACGGAAAPPRQRV
RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSRLGGAAAVAPLVADM
SSEGRGGVAVAAGSDDGLAVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPPVGGPGLGVAAAAAH
HMAAMRLPPHAMNGGAGAGADAVPASPSMSVLTAQSAMAPNGAGGGTDGEGSHSQQQQRHHPKDAASVSKP

Nucleotide Sequence
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ACATTCGATTCCGTTCTGATCCATC...


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